// Dependencies
    const htmlclean = require('htmlclean');
    const fs = require('fs');
    const path = require('path');
    const pretty = require('pretty');
    const cheerio = require('cheerio');
    const rimraf = require('rimraf');
    const dedent = require('dedent-js');

// Arg Vars
    const copyLocal = process.argv[2];
    console.log("copyLocal:", copyLocal);
    let targetTemplateDirectory = ''
    let targetMDDirectory = ''
    if (copyLocal){
        targetTemplateDirectory = process.argv[3];
        targetMDDirectory = process.argv[4];;
    }

// Required directories
    let dir_out = path.join(__dirname, 'out');

    let dir_grav = path.join(dir_out, 'grav');
    let dir_css = path.join(dir_grav, 'css');
    let dir_js = path.join(dir_grav, 'js');
    let dir_template = path.join(dir_grav, 'templates');

    let dir_md = path.join(dir_grav, '06.api-reference');
    let dir_md_objects = path.join(dir_md, '02.Objects');
    let dir_md_namespaces = path.join(dir_md, '01.Namespaces');
    let dir_md_globals = path.join(dir_md, '03.Globals');
    
// Array to itterate over and create if doesn't exist
    let dirArray = [dir_grav, dir_css, dir_js, dir_template, dir_md, dir_md_objects, dir_md_namespaces, dir_md_globals];

// Maps for directory names
    let map_dir_md = {
        "API-Reference": dir_md,
        "Globals": dir_md_globals,  
        "Objects": dir_md_objects,
        "Namespaces": dir_md_namespaces,
        "Class": dir_md_objects,
        "Namespace": dir_md_namespaces,
        "Global": dir_md_globals
    }

// Base Grouping Directories for MD files
    let baseMDDirectories = ["API-Reference", "Globals", "Namespaces", "Objects"]

// Html variables to be handle regex replacements
    const html_reg_static = /<span class="type-signature">\(static\)<\/span>/g
    const html_reg_title = /\<h1.+?\>.+?\<\/h1\>/g;
    const html_reg_htmlExt = /\.html/g;
    const html_reg_objectHeader = /<header>[\s\S]+?<\/header>/;
    const html_reg_objectSpanNew = /<h4 class="name"[\s\S]+?<\/span><\/h4>/;
    const html_reg_brRemove = /<br>[\s\S]+?<br>/;
    const html_reg_subsectionEdit = /(<h. class="subsection-title">)([\s\S]*?)(<\/h.>)/g;
    const html_reg_subsectionEdit_replace = '<h4 class="subsection-title">$2</h4>';
    const html_reg_propertiesHeaderEdit = '<h4 class="subsection-title">Properties:</h4>';
    const html_reg_propertiesHeaderEdit_Replace = '<h4 class="subsection-title">Properties</h4>';
    const html_reg_typeEdit = /(<h5>Returns[\s\S]*?Type)(<\/dt[\s\S]*?type">)(.*?)(<\/span><\/dd>[\s\S]*?<\/dl>)/g;
    const html_reg_typeEdit_replace = '$1: $3</dt></dl>'
    const html_reg_methodSize = /(<h4)( class="name"[\s\S].*?<\/span>)(<\/h4>)/g;
    const html_reg_methodSize_replace = '<h5$2</h5>';
    const html_reg_returnSize = /<h5>Returns:<\/h5>/g;
    const html_reg_returnSize_replace = '<h6>Returns:<\/h6>';
    const html_reg_findByName = '<h5 class="name"';
    const html_reg_findByMethod = `<h4 class="subsection-title">Methods</h4>`
    const html_reg_findByArticleClose = `</article>`
    const html_reg_signalTitle = `<h4 class="subsection-title">Signals</h4>`;


// Mapping for GroupNames and Members
    let groupNameMemberMap = {
        "Objects": [],
        "Namespaces": [],
        "Globals": []
    }

// Procedural functions
    // Create the actual MD file
    function createMD(title, directory, needsDir, isGlobal){
        let mdSource = makeMdSource(title);
        
        if (needsDir){
            if (!fs.existsSync(directory)) {
                fs.mkdirSync(directory);
            }
        }

        let destinationMDFile = path.join(directory, `API_${title}.md`);        
        fs.writeFileSync(destinationMDFile, mdSource);
    }

    // Create the actual Template file
    function createTemplate(title,content){
        let twigBasePartial = makeTwigFile(content);
        let destinationFile = path.join(dir_template, `API_${title}.html.twig`);
        fs.writeFileSync(destinationFile, twigBasePartial);
    }

    // Copy file from source to target - used for recurssive call
    function copyFileSync( source, target ) {
        let targetFile = target;

        // If target is a directory a new file with the same name will be created
        if ( fs.existsSync( target ) ) {
            // console.log("target exists");
            if ( fs.lstatSync( target ).isDirectory() ) {
                // console.log("target is a directory");
                
                targetFile = path.join( target, path.basename( source ) );
            }
        }

        fs.writeFileSync(targetFile, fs.readFileSync(source));
    }

    // Copy file from source to target
    function copyFolderRecursiveSync( source, target ) {
        var files = [];

        // Check if folder needs to be created or integrated
        var targetFolder = path.join( target, path.basename( source ) );
        if ( !fs.existsSync( targetFolder ) ) {
            fs.mkdirSync( targetFolder );
        }

        // Copy
        if ( fs.lstatSync( source ).isDirectory() ) {
            files = fs.readdirSync( source );
            files.forEach( function ( file ) {
                var curSource = path.join( source, file );
                if ( fs.lstatSync( curSource ).isDirectory() ) {
                    copyFolderRecursiveSync( curSource, targetFolder );
                } else {
                    copyFileSync( curSource, targetFolder );
                }
            } );
        }
    }

    // Clean up the Html
    function prepareHtml(source){
        let htmlBefore = fs.readFileSync(source, {encoding: 'utf8'});
        let htmlAfter = htmlclean(htmlBefore);
        let htmlAfterPretty = pretty(htmlAfter);
        return cheerio.load(htmlAfterPretty);
    }

    // Base file for MD's
    function makeMdSource(title){
        return dedent(
            `
            ---
            title: ${title}
            taxonomy:
                category:
                    - docs
            visible: true
            ---
            `
        )
    }

    // Base file for Templates
    function makeTwigFile(contentHtml){
        return dedent(
            `
            {% extends 'partials/base_noGit.html.twig' %}
            {% set tags = page.taxonomy.tag %}
            {% if tags %}
                {% set progress = page.collection({'items':{'@taxonomy':{'category': 'docs', 'tag': tags}},'order': {'by': 'default', 'dir': 'asc'}}) %}
            {% else %}
                {% set progress = page.collection({'items':{'@taxonomy':{'category': 'docs'}},'order': {'by': 'default', 'dir': 'asc'}}) %}
            {% endif %}
            
            {% block navigation %}
                <div id="navigation">
                {% if not progress.isFirst(page.path) %}
                    <a class="nav nav-prev" href="{{ progress.nextSibling(page.path).url }}"> <img src="{{ url('theme://images/left-arrow.png') }}"></a>
                {% endif %}
            
                {% if not progress.isLast(page.path) %}
                    <a class="nav nav-next" href="{{ progress.prevSibling(page.path).url }}"><img src="{{ url('theme://images/right-arrow.png') }}"></a>
                {% endif %}
                </div>
            {% endblock %}
            
            {% block content %}
                <div id="body-inner">
                <h1>{{ page.title }}</h1>
                ${contentHtml}
                </div>
            {% endblock %}
            `
        )
    }

    // Handle NameSpace Group   
    function handleNamespace(title, content){
        groupNameMemberMap["Namespaces"].push(title);
        let destinationDirectory = path.join(map_dir_md["Namespace"], title);
        createMD(title, destinationDirectory, true);
        createTemplate(title, content);
    }

    // Handle Class Group       
    function handleClass(title, content){
        groupNameMemberMap["Objects"].push(title);
        let destinationDirectory = path.join(map_dir_md["Class"], title);
        createMD(title, destinationDirectory, true)

        let formatedHtml = content
                            .replace(html_reg_objectSpanNew,"")
        createTemplate(title, formatedHtml);
    }

    // Handle Global Group           
    function handleGlobal(title, content){
        groupNameMemberMap["Globals"].push("Globals");
        createMD("Globals", map_dir_md["Global"], false, true);
        createTemplate("Globals", content); 
    }

    // Handle Group TOCs               
    function makeGroupTOC(group){
            let mappedGroup;
        if (!Array.isArray(group)){
            mappedGroup = groupNameMemberMap[group];
        } else {
            mappedGroup = group;
        }
        let htmlGroup = mappedGroup.map( item => {
            return dedent(
                `
                <div>
                    <a href="/api-reference/${
                        !Array.isArray(group)
                        ? `${group.toLowerCase()}/` + item.toLowerCase()
                        : item.toLowerCase()
                    }/">${item}</a>
                </div>
                `
            )
        })
        return htmlGroup.join("\n");
    }

    // Helper for splitting up html 
    // Takes: Content to split, SearchTerm to Split by, and term to End Splitting By
    // Returns: [newContent after Split, Array of extracted ]
    function splitBy(content, searchTerm, endSplitTerm){
        let foundArray = [];
        let curIndex = -1;
        let nextIndex = 0;
        let findbyNameLength = searchTerm.length;
        let curfoundArrayIndex = 0;
        let curEndSplitTermIndex = -1;
        do {
            curEndSplitTermIndex = content.indexOf(endSplitTerm);                    
            curIndex = content.indexOf(searchTerm);
            // Search after initial index + length of searchterm
            nextIndex = content.indexOf(searchTerm,curIndex+findbyNameLength);
            if (nextIndex === -1){
                nextIndex = curEndSplitTermIndex
            }
            foundArray.push(content.slice(curIndex, nextIndex))
            // remove that content
            content = content.replace(foundArray[curfoundArrayIndex], "");
            curfoundArrayIndex++;
        } while (curIndex > -1)
        return [content, foundArray];
    }

    // Split the signals and methods [Might make this more generic]
    function splitMethodsAndSignals(methodArray){
        let newMethodArray = [];
        let signalArray = [];
        methodArray.forEach( method => {
            method.indexOf("Signal") > -1
            ? signalArray.push(method)
            : newMethodArray.push(method);2
        })
        return [newMethodArray, signalArray]
    }

    // Helper to append
    // Takes content, the search term to appendTo, the content to append, 
    // and bool if the append is before the found area
    function append(content, searchTermToAppendto, contentToAppend, appendBefore){
        let contentArray = content.split("\n");
        let foundIndex = findArrayTrim(contentArray, searchTermToAppendto)
        foundIndex = appendBefore ? foundIndex : foundIndex +1
        
        contentArray.splice(foundIndex,0,contentToAppend)
        return contentArray.join("\n")
    }

    // Helper function for append
    function findArrayTrim(array, searchTerm){
        var index = -1;
        for (var i = 0; i < array.length; i++){
            index = array[i].trim().indexOf(searchTerm.trim());
            if (index > -1){
                return i
            }
        }
        return index;
    }


// Remove grav directory if exists to make sure old files aren't kept
    if (fs.existsSync(dir_grav)){
        console.log("dir_grav exists");
        rimraf.sync(dir_grav);
    }

// Create Grav directories in JSDOC output
    dirArray.forEach(function(dir){
        if (!fs.existsSync(dir)) {
            fs.mkdirSync(dir);
        }
    })

// Create baseMD files
    baseMDDirectories.forEach( md => {
        createMD(md, map_dir_md[md]);
    })

// Read jsdoc output folder and process html files
    let files = fs.readdirSync(dir_out);
    files.forEach(function (file){
        let curSource = path.join(dir_out, file);
        if (path.extname(curSource) == ".html" && path.basename(curSource, '.html') !== "index") {
            // Clean up the html source
                let loadedHtml = prepareHtml(curSource);

            // Extract the title, group name, and the main div
                let splitTitle = loadedHtml("title").text().split(": ");
                let groupName = splitTitle[1];
                let htmlTitle = splitTitle.pop();
                let mainDiv = loadedHtml("#main")
            
            // Basic Regex HTML edits
                let mainDivRegexed = mainDiv.html()
                                        .replace(html_reg_static,"")
                                        .replace(html_reg_title,"")
                                        .replace(html_reg_objectHeader,"")
                                        .replace(html_reg_htmlExt,"")
                                        .replace(html_reg_brRemove, "")
                                        .replace(html_reg_subsectionEdit, html_reg_subsectionEdit_replace)
                                        .replace(html_reg_propertiesHeaderEdit, html_reg_propertiesHeaderEdit_Replace)
                                        .replace(html_reg_typeEdit, html_reg_typeEdit_replace)
                                        .replace(html_reg_returnSize, html_reg_returnSize_replace)
                                        .replace(html_reg_methodSize, html_reg_methodSize_replace);
            
            // Further HTML Manipulation
                // Split HTML by Each named entry
                let contentSplitArray = splitBy(mainDivRegexed, html_reg_findByName);
                // Create a reference to the current content after split and the split functions
                let currentContent = contentSplitArray[0];
                // Create references to the split methods and signals
                let splitSignalsAndMethods = splitMethodsAndSignals(contentSplitArray[1]);
                let splitMethods = splitSignalsAndMethods[0];
                let splitSignals = splitSignalsAndMethods[1];
                // Append Signals and Methods to the current Content
                currentContent = append(currentContent, html_reg_findByMethod, splitMethods.join('\n'));
                console.log(path.basename(curSource, '.html'), splitSignals.length);                
                if (splitSignals.length > 0) {
                    // Add the Signals header to the Signals HTML
                    splitSignals.unshift(html_reg_signalTitle)
                    currentContent = append(currentContent, html_reg_findByArticleClose, splitSignals.join('\n',true));        
                }

                // Final Pretty Content
                currentContent = htmlclean(currentContent);
                currentContent = pretty(currentContent);
        
            // Handle Unique Categories
                switch(groupName){
                    case "Namespace":
                        handleNamespace(htmlTitle, currentContent);
                        break;
                    case "Class":
                        handleClass(htmlTitle, currentContent);
                        break;
                    case "Global":
                        handleGlobal(htmlTitle, currentContent);
                        break;
                    default:
                        console.log(`Case not handled for ${groupName}`);
                }
        }
    })

// Create the base Templates after processing individual files
    createTemplate("API-Reference", makeGroupTOC(["Namespaces", "Objects", "Globals"]));
    createTemplate("Namespaces", makeGroupTOC("Namespaces"));
    createTemplate("Objects", makeGroupTOC("Objects"));

// Copy the files to the target Directories if Local
    if (copyLocal){
        // Copy files to the Twig Directory
        let templateFiles = fs.readdirSync(path.resolve(targetTemplateDirectory));
        // Remove Existing API files
        templateFiles.forEach(function(file){
            let curSource = path.join(targetTemplateDirectory, file);
                
            if(path.basename(file, '.html').indexOf("API") > -1){
                fs.unlink(curSource);
            }
        })
        copyFolderRecursiveSync(dir_template, targetTemplateDirectory);
    
        // Copy files to the Md Directory
        let baseMdRefDir = path.join(targetMDDirectory,"06.api-reference");
        // Remove existing MD directory
        if (fs.existsSync(baseMdRefDir)){
            rimraf.sync(baseMdRefDir);
        }
        copyFolderRecursiveSync(dir_md, targetMDDirectory);
    }