mirror of
https://github.com/JulianGro/overte.git
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9036 lines
No EOL
214 KiB
JavaScript
9036 lines
No EOL
214 KiB
JavaScript
// Copyright 2016 High Fidelity, Inc.
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//
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//
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// Distributed under the Apache License, Version 2.0.
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// See the accompanying file LICENSE or http://www.apache.org/licenses/LICENSE-2.0.html
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//
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var version = 1219;
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var WORLD_OFFSET = {
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x: 0,
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y: 0,
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z: 0
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}
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var WORLD_SCALE_AMOUNT = 1.0;
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function offsetVectorToWorld(vector) {
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var newVector;
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newVector = Vec3.sum(vector, WORLD_OFFSET);
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return newVector
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}
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function scaleVectorToWorld(vector) {
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var newVector;
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newVector = Vec3.multiply(vector, WORLD_SCALE_AMOUNT);
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return newVector
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}
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function transformToSmallerWorld(vector) {
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var newVector = offsetVectorToWorld(vector);
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// newVector = scaleVectorToWorld(newVector);
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return newVector;
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}
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var cellLayout;
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var baseLocation = "https://hifi-content/DomainContent/CellScience/";
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var utilsScript = Script.resolvePath('Scripts/utils.js');
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Script.include(utilsScript);
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assignVariables();
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var locations = {
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cellLayout: [offsetVectorToWorld({
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x: 3000,
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y: 13500,
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z: 3000
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}), offsetVectorToWorld({
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x: 3276.6,
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y: 13703.3,
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z: 4405.6
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}), 1800],
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cells: [offsetVectorToWorld({
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x: 13500,
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y: 13500,
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z: 13500
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}), offsetVectorToWorld({
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x: 13501,
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y: 13501,
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z: 13501
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}), 400],
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ribosome: [offsetVectorToWorld({
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x: 13500,
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y: 3000,
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z: 3000
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}), offsetVectorToWorld({
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x: 13685,
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y: 3248,
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z: 2861
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}), 1000],
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hexokinase: [offsetVectorToWorld({
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x: 3000,
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y: 3000,
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z: 13500
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}), offsetVectorToWorld({
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x: 2755,
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y: 3121,
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z: 13501
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}), 2000],
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mitochondria: [offsetVectorToWorld({
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x: 3000,
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y: 13500,
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z: 3000
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}), offsetVectorToWorld({
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x: 3240,
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y: 13519,
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z: 3874
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}), 1000],
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translation: [offsetVectorToWorld({
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x: 3000,
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y: 13500,
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z: 3000
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}), offsetVectorToWorld({
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x: 2962,
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y: 13492,
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z: 3342
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}), 1000]
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};
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var scenes = [{
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name: "Cells",
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objects: "",
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location: locations.cells[0],
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entryPoint: locations.cells[1],
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zone: {
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dimensions: {
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x: 4000,
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y: 4000,
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z: 4000
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},
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light: {
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r: 255,
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g: 200,
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b: 200
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},
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intensity: 1.1,
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ambient: 0.7,
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sun: true,
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skybox: "cells_skybox_cross"
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},
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instances: [{
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model: "Cell",
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dimensions: {
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x: 500,
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y: 570,
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z: 500
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},
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offset: {
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x: 0,
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y: 0,
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z: 0
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},
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radius: 500,
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number: 10,
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userData: JSON.stringify({
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entryPoint: locations.cellLayout[1],
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target: locations.cellLayout[1],
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location: locations.cellLayout[1],
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baseURL: baseLocation
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}),
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script: "zoom.js?" + version,
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visible: true
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}],
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boundary: {
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radius: locations.cells[2],
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center: locations.cells[0],
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location: locations.cellLayout[1],
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target: locations.cellLayout[0]
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}
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}, {
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name: "CellLayout",
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objects: cellLayout,
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location: locations.cellLayout[0],
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entryPoint: locations.cellLayout[1],
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zone: {
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dimensions: {
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x: 4000,
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y: 4000,
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z: 4000
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},
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light: {
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r: 247,
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g: 233,
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b: 220
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},
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intensity: 2.3,
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ambient: 0.7,
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sun: true,
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skybox: "cosmos_skybox_blurred"
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},
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instances: [{
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model: "translation",
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dimensions: {
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x: 10,
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y: 16,
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z: 10
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},
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offset: {
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x: 0,
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y: 0,
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z: 0
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},
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radius: 300,
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number: 7,
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userData: JSON.stringify({
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grabbableKey: {
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grabbable: false
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},
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target: locations.ribosome[1],
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location: locations.ribosome[0],
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baseURL: baseLocation
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}),
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script: "zoom.js?" + version,
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visible: true
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}, {
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model: "vesicle",
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dimensions: {
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x: 60,
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y: 60,
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z: 60
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},
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randomSize: 10,
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offset: {
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x: 0,
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y: 0,
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z: 0
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},
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radius: 1000,
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number: 22,
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userData: JSON.stringify({
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grabbableKey: {
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grabbable: false
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}
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}),
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script: null,
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visible: true
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}, { //golgi vesicles
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model: "vesicle",
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dimensions: {
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x: 10,
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y: 10,
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z: 10
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},
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randomSize: 10,
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offset: {
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x: -319,
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y: 66,
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z: 976
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},
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radius: 140,
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number: 10,
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userData: JSON.stringify({
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grabbableKey: {
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grabbable: false
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}
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}),
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script: null,
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visible: true
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}, { //golgi vesicles
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model: "vesicle",
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dimensions: {
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x: 15,
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y: 15,
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z: 15
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},
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randomSize: 10,
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offset: {
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x: -319,
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y: 66,
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z: 976
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},
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radius: 115,
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number: 7,
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userData: JSON.stringify({
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grabbableKey: {
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grabbable: false
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}
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}),
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script: null,
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visible: true
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}, {
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model: "vesicle",
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dimensions: {
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x: 50,
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y: 50,
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z: 50
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},
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randomSize: 10,
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offset: {
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x: 0,
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y: 0,
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z: 0
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},
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radius: 600,
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number: 15,
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userData: JSON.stringify({
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grabbableKey: {
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grabbable: false
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}
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}),
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script: null,
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visible: true
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}, { //outer vesicles
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model: "vesicle",
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dimensions: {
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x: 60,
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y: 60,
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z: 60
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},
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randomSize: 10,
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offset: {
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x: 0,
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y: 0,
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z: 0
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},
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radius: 1600,
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number: 22,
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userData: JSON.stringify({
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grabbableKey: {
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grabbable: false
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}
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}),
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script: null,
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visible: true
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}, { //outer vesicles
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model: "vesicle",
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dimensions: {
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x: 40,
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y: 40,
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z: 40
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},
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randomSize: 10,
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offset: {
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x: 0,
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y: 0,
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z: 0
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},
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radius: 1400,
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number: 22,
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userData: JSON.stringify({
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grabbableKey: {
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grabbable: false
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}
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}),
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script: null,
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visible: true
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}, { //outer vesicles
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model: "vesicle",
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dimensions: {
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x: 80,
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y: 80,
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z: 80
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},
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randomSize: 10,
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offset: {
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x: 0,
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y: 0,
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z: 0
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},
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radius: 1800,
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number: 22,
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userData: JSON.stringify({
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grabbableKey: {
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grabbable: false
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}
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}),
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script: null,
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visible: true
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}, {
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model: "hexokinase",
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dimensions: {
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x: 3,
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y: 4,
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z: 3
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},
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randomSize: 10,
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offset: {
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x: 236,
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y: 8,
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z: 771
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},
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radius: 80,
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number: 7,
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userData: JSON.stringify({
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grabbableKey: {
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grabbable: false
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},
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target: locations.hexokinase[1],
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location: locations.hexokinase[0],
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baseURL: baseLocation
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}),
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script: "zoom.js?" + version,
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visible: true
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}, {
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model: "pfructo_kinase",
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dimensions: {
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x: 3,
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y: 4,
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z: 3
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},
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randomSize: 10,
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offset: {
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x: 236,
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y: 8,
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z: 771
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},
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radius: 60,
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number: 7,
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userData: JSON.stringify({
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grabbableKey: {
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grabbable: false
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},
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target: locations.hexokinase[1],
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location: locations.hexokinase[0],
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}),
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script: "zoom.js?" + version,
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visible: true
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}, {
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model: "glucose_isomerase",
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dimensions: {
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x: 3,
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y: 4,
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z: 3
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},
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randomSize: 10,
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offset: {
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x: 236,
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y: 8,
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z: 771
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},
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radius: 70,
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number: 7,
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userData: JSON.stringify({
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grabbableKey: {
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grabbable: false
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},
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target: locations.hexokinase[1],
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location: locations.hexokinase[0],
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}),
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script: "zoom.js?" + version,
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visible: true
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}],
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boundary: {
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radius: locations.cellLayout[2],
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center: locations.cellLayout[0],
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location: locations.cells[1],
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target: locations.cells[0]
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}
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}, {
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name: "Ribosome",
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objects: "",
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location: locations.ribosome[0],
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entryPoint: locations.ribosome[1],
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zone: {
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dimensions: {
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x: 4000,
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y: 4000,
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z: 4000
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},
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light: {
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r: 250,
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g: 185,
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b: 182
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},
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intensity: 0.6,
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ambient: 2.9,
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sun: true,
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skybox: "ribosome_skybox"
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},
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instances: [{
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model: "translation_highres",
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dimensions: {
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x: 500,
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y: 500,
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z: 200
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},
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offset: {
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x: 0,
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y: 0,
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z: 0
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},
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radius: 1,
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number: 1,
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userData: JSON.stringify({
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grabbableKey: {
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grabbable: false
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}
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}),
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script: null,
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visible: true
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}],
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boundary: {
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radius: locations.ribosome[2],
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center: locations.ribosome[0],
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location: locations.translation[1],
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target: locations.translation[0]
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}
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}, {
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name: "Hexokinase",
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objects: "",
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location: locations.hexokinase[0],
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entryPoint: locations.hexokinase[1],
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zone: {
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dimensions: {
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x: 4000,
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y: 4000,
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z: 4000
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},
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light: {
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r: 255,
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g: 255,
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b: 255
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},
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intensity: 0.6,
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ambient: 0.6,
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sun: true,
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skybox: "hexokinase_skybox"
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},
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instances: [{
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model: "hexokinase_highres",
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dimensions: {
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x: 600,
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y: 600,
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z: 600
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},
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offset: {
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x: 0,
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y: 0,
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z: 0
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},
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radius: 1,
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number: 1,
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userData: JSON.stringify({
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grabbableKey: {
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grabbable: false
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}
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}),
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script: null,
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visible: true
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}],
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boundary: {
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radius: locations.hexokinase[2],
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center: locations.hexokinase[0],
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location: locations.mitochondria[1],
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target: locations.mitochondria[0]
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}
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}];
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function ImportScene(scene) {
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var sceneDataLines = scene.objects.split(";");
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for (var i = 1; i < sceneDataLines.length; i++) {
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var data = sceneDataLines[i].split(",");
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var posX = Number(data[1]) + scene.location.x;
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var posY = Number(data[2]) + scene.location.y;
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var posZ = Number(data[3]) + scene.location.z;
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var url = baseLocation + scene.name + "/" + data[0] + ".fbx?" + version;
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var position = {
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x: posX,
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y: posY,
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z: posZ
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};
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var dimensions = {
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x: data[4],
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y: data[5],
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z: data[6]
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};
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var rotation = Quat.fromPitchYawRollDegrees(data[7], data[8], data[9]);
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var name = data[0].replace(/[0-9]/g, '');
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var labelDistance = (Number(data[4]) + Number(data[5]) + Number(data[6])) / 3 + 50;
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var idDimensions = {
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x: Number(dimensions.x) + 200,
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y: Number(dimensions.y) + 200,
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z: Number(dimensions.z) + 200
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};
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//print ("Label distance is " + labelDistance + " for " + name);
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if (name != "" && name != "NPC" && name != "undefined" && name != "microtubule")
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CreateIdentification(name, position, {
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x: 0,
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y: 0,
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z: 0
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}, idDimensions, labelDistance);
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CreateEntity(data[0], position, rotation, dimensions, url, "", "", true);
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}
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if (scene.name == "CellLayout") {
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MakeMTEnds();
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MakeMTLabels();
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}
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//create zone and instances
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CreateZone(scene);
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CreateInstances(scene);
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// CreateBoundary(scene);
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// print("done " + scene.name);
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}
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|
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function createLayoutLights() {
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Entities.addEntity({
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type: "Light",
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name: "Cell layout light",
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position: offsetVectorToWorld({
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x: 3110,
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y: 10660,
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z: 3785
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}),
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dimensions: {
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x: 1500,
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y: 1500,
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z: 1500
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},
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intensity: 0.5,
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color: {
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red: 240,
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green: 165,
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blue: 240
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}
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})
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}
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|
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function CreateNavigationButton(scene, name) {
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|
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var navProps = {
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type: "Box",
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name: scene.name + " navigation button",
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color: {
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red: 200,
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green: 0,
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blue: 0
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},
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dimensions: {
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x: 16000,
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y: 16000,
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z: 16000
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},
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visible: false,
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userData: JSON.stringify({
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name: scene.name,
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entryPoint: scene.entryPoint,
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target: scene.location,
|
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baseURL: baseLocation,
|
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grabbableKey: {
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grabbable: false
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}
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}),
|
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position: {
|
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x: 0,
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y: 0,
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z: 0
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},
|
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collisionless: true,
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}
|
|
|
|
var scriptURL = baseLocation + "Scripts/nav_button_" + name + ".js?" + version;
|
|
|
|
navProps.script = scriptURL;
|
|
var nav = Entities.addEntity(navProps);
|
|
|
|
|
|
print('JBP CREATE NAV AT::' + nav + " name: " + scene.name + ": " + JSON.stringify(scene.location))
|
|
}
|
|
|
|
function CreateBoundary(scene) {
|
|
// print('CREATING BOUNDARY FOR SCENE '+ JSON.stringify(scene));
|
|
var pts = getEvenlyDistributedPointsOnSphere(80);
|
|
|
|
for (var i = 0; i < pts.length; i++) {
|
|
|
|
var boundPos = {
|
|
x: scene.boundary.center.x + scene.boundary.radius * pts[i].x,
|
|
y: scene.boundary.center.y + scene.boundary.radius * pts[i].y,
|
|
z: scene.boundary.center.z + scene.boundary.radius * pts[i].z
|
|
};
|
|
var script = "zoom.js?" + version;
|
|
var dimensions = {
|
|
x: 0.6 * scene.boundary.radius,
|
|
y: 0.6 * scene.boundary.radius,
|
|
z: 100
|
|
};
|
|
var boundRot = getLookRotation(boundPos, scene.boundary.center);
|
|
var data = JSON.stringify({
|
|
target: scene.boundary.target,
|
|
location: scene.boundary.location,
|
|
baseURL: baseLocation,
|
|
});
|
|
|
|
Entities.addEntity({
|
|
type: "Sphere",
|
|
name: "boundary",
|
|
color: {
|
|
red: 200,
|
|
green: 0,
|
|
blue: 0
|
|
},
|
|
position: boundPos,
|
|
rotation: boundRot,
|
|
dimensions: dimensions,
|
|
visible: false,
|
|
userData: data,
|
|
script: baseLocation + "Scripts/" + script,
|
|
collisionless: true,
|
|
|
|
});
|
|
}
|
|
|
|
}
|
|
|
|
function getLookRotation(loc, targetPos) {
|
|
|
|
var direction = Vec3.normalize(Vec3.subtract(loc, targetPos));
|
|
|
|
var pitch = Quat.angleAxis(Math.asin(-direction.y) * 180.0 / Math.PI, {
|
|
x: 1,
|
|
y: 0,
|
|
z: 0
|
|
});
|
|
var yaw = Quat.angleAxis(Math.atan2(direction.x, direction.z) * 180.0 / Math.PI, {
|
|
x: 0,
|
|
y: 1,
|
|
z: 0
|
|
});
|
|
|
|
return Quat.multiply(yaw, pitch);
|
|
}
|
|
|
|
|
|
function getEvenlyDistributedPointsOnSphere(numPoints) {
|
|
|
|
var points = [];
|
|
|
|
var inc = Math.PI * (3 - Math.sqrt(5));
|
|
var off = 2 / numPoints;
|
|
|
|
for (var i = 0; i < numPoints; i++) {
|
|
var y = i * off - 1 + (off / 2);
|
|
var r = Math.sqrt(1 - y * y);
|
|
var phi = i * inc;
|
|
|
|
points[i] = {
|
|
x: Math.cos(phi) * r,
|
|
y: y,
|
|
z: Math.sin(phi) * r
|
|
};
|
|
}
|
|
|
|
return points;
|
|
}
|
|
|
|
function deleteAllInRadius(position, radius) {
|
|
var n = 0;
|
|
var arrayFound = Entities.findEntities(position, radius);
|
|
for (var i = 0; i < arrayFound.length; i++) {
|
|
|
|
Entities.deleteEntity(arrayFound[i]);
|
|
}
|
|
// print("deleted " + arrayFound.length + " entities");
|
|
}
|
|
|
|
function CreateInstances(scene) {
|
|
for (var i = 0; i < scene.instances.length; i++) {
|
|
|
|
for (var j = 0; j < scene.instances[i].number; j++) {
|
|
var point = getPointOnSphereOfRadius(scene.instances[i].radius, j + 2, scene.instances[i].number);
|
|
// print(scene.name + " point is " + point.x + " " + point.y + " " + point.z);
|
|
|
|
var posX = scene.location.x + point.x + scene.instances[i].offset.x + Math.random() * (scene.instances[i].radius / 10);
|
|
var posY = scene.location.y + point.y + scene.instances[i].offset.y + Math.random() * (scene.instances[i].radius / 10);
|
|
var posZ = scene.location.z + point.z + scene.instances[i].offset.z + Math.random() * (scene.instances[i].radius / 10);
|
|
var position = {
|
|
x: posX,
|
|
y: posY,
|
|
z: posZ
|
|
};
|
|
var url = baseLocation + "Instances/" + scene.instances[i].model + ".fbx?" + version;
|
|
var script = scene.instances[i].script;
|
|
var rotX = 360 * Math.random() - 180;
|
|
var rotY = 360 * Math.random() - 180;
|
|
var rotZ = 360 * Math.random() - 180;
|
|
var rotation = Quat.fromPitchYawRollDegrees(rotX, rotY, rotZ);
|
|
var dimensions;
|
|
if (scene.instances[i].script === "") {
|
|
script = "";
|
|
}
|
|
//is there a smarter way to randomize size?
|
|
// if (scene.instances[i].randomSize){
|
|
// dimensions = {x:scene.instances[i].dimensions.x }
|
|
// }
|
|
if (scene.instances[i].model == "vesicle") {
|
|
var idBounds = {
|
|
x: scene.instances[i].dimensions.x + 100,
|
|
y: scene.instances[i].dimensions.y + 100,
|
|
z: scene.instances[i].dimensions.z + 100
|
|
};
|
|
CreateIdentification(scene.instances[i].model, position, {
|
|
x: 0,
|
|
y: 0,
|
|
z: 0
|
|
}, idBounds, 150, scene.instances[i]);
|
|
|
|
}
|
|
//print('SCRIPT AT CREATE ENTITY: ' + script)
|
|
CreateEntity(scene.instances[i].model, position, rotation, scene.instances[i].dimensions, url, script, scene.instances[i].userData, scene.instances[i].visible);
|
|
}
|
|
}
|
|
}
|
|
|
|
|
|
|
|
function CreateIdentification(name, position, rotation, dimensions, showDistance) {
|
|
//print ("creating ID for " + name);
|
|
|
|
Entities.addEntity({
|
|
type: "Sphere",
|
|
name: "ID for " + name,
|
|
color: {
|
|
red: 200,
|
|
green: 0,
|
|
blue: 0
|
|
},
|
|
dimensions: dimensions,
|
|
position: position,
|
|
rotation: rotation,
|
|
visible: false,
|
|
userData: JSON.stringify({
|
|
showDistance: showDistance,
|
|
name: name,
|
|
baseURL: baseLocation,
|
|
}),
|
|
script: baseLocation + "Scripts/showIdentification.js?" + version,
|
|
collisionless: true,
|
|
|
|
});
|
|
|
|
}
|
|
|
|
|
|
function getPointOnSphereOfRadius(radius, number, totalNumber) {
|
|
|
|
// var phi = 2 * Math.PI * Math.random();
|
|
// var theta = Math.PI * Math.random();
|
|
// return {
|
|
// x: radius * Math.sin(theta) * Math.cos(phi),
|
|
// y: radius * Math.sin(theta) * Math.sin(phi),
|
|
// z: radius * Math.cos(theta)
|
|
// };
|
|
|
|
|
|
|
|
var inc = Math.PI * (3 - Math.sqrt(5));
|
|
var off = 2 / totalNumber;
|
|
|
|
|
|
var y = number * off - 1 + (off / 2);
|
|
var r = Math.sqrt(1 - y * y);
|
|
var phi = number * inc;
|
|
|
|
// print("inc " + inc + " off " + off + " y " + y + " r " + r + " phi " + phi);
|
|
|
|
if (isNaN(r)) {
|
|
//print("r is not a number");
|
|
r = 1;
|
|
}
|
|
|
|
// print("cos phi is " + Math.cos(phi));
|
|
return {
|
|
x: Math.cos(phi) * r * radius,
|
|
y: y * radius,
|
|
z: Math.sin(phi) * r * radius
|
|
};
|
|
|
|
|
|
|
|
}
|
|
|
|
function CreateEntity(name, position, rotation, dimensions, url, script, userData, visible) {
|
|
|
|
var entityProps = {
|
|
type: "Model",
|
|
name: name,
|
|
position: position,
|
|
rotation: rotation,
|
|
dimensions: dimensions,
|
|
modelURL: url,
|
|
visible: visible,
|
|
animationURL: url,
|
|
animationIsPlaying: true,
|
|
animationFrame: Math.random() * 1000,
|
|
angularDamping: 0,
|
|
linearDamping: 0,
|
|
animationSettings: JSON.stringify({
|
|
firstFrame: 0,
|
|
lastFrame: 1000,
|
|
fps: 30,
|
|
frameIndex: Math.random() * 1000,
|
|
hold: false,
|
|
loop: true,
|
|
running: true,
|
|
startAutomatically: true
|
|
}),
|
|
userData: userData,
|
|
collisionless: true,
|
|
shapeType: "compound",
|
|
compoundShapeURL: url
|
|
}
|
|
|
|
|
|
if (script !== null) {
|
|
if (script !== "" && typeof script !== undefined) {
|
|
entityProps.script = baseLocation + "Scripts/" + script;
|
|
}
|
|
}
|
|
|
|
Entities.addEntity(entityProps);
|
|
|
|
// print("added " + name + " at (" + position.x + ", " + position.y + ", " + position.z + ")");
|
|
|
|
}
|
|
|
|
function CreateZone(scene) {
|
|
// print ("Creating " + scene.name + " zone.........................");
|
|
Entities.addEntity({
|
|
type: "Zone",
|
|
name: scene.name + " Zone",
|
|
position: {
|
|
x: scene.location.x,
|
|
y: scene.location.y,
|
|
z: scene.location.z
|
|
},
|
|
dimensions: {
|
|
x: scene.zone.dimensions.x,
|
|
y: scene.zone.dimensions.y,
|
|
z: scene.zone.dimensions.z
|
|
},
|
|
keyLightColor: {
|
|
red: scene.zone.light.r,
|
|
green: scene.zone.light.g,
|
|
blue: scene.zone.light.b
|
|
},
|
|
keyLightDirection: {
|
|
x: 0,
|
|
y: -1.0,
|
|
z: 0
|
|
},
|
|
keyLightIntensity: scene.zone.intensity,
|
|
keyLightAmbientIntensity: scene.zone.ambient,
|
|
backgroundMode: "skybox",
|
|
skybox: {
|
|
color: {
|
|
red: 232,
|
|
green: 209,
|
|
blue: 235
|
|
},
|
|
url: baseLocation + "Skyboxes/" + scene.zone.skybox + ".jpg?" + version
|
|
},
|
|
stage: {
|
|
latitude: 37.777,
|
|
longitude: 122.407,
|
|
altitude: 0.03,
|
|
day: 60,
|
|
hour: 12,
|
|
sunModelEnabled: true
|
|
}
|
|
});
|
|
}
|
|
|
|
|
|
function MakeMTEnds() {
|
|
|
|
for (var mt = 0; mt < curves.length; mt++) {
|
|
// print("creating MT end " + mt);
|
|
MakeMTEnd(curves[mt][0], 0, true);
|
|
MakeMTEnd(curves[mt][curves[mt].length - 1], 1, false);
|
|
}
|
|
|
|
}
|
|
|
|
var mtEndURL = "Tubulin/tubulin.fbx?" + version;
|
|
var mtEndDimensions = {
|
|
x: 12,
|
|
y: 12,
|
|
z: 24
|
|
};
|
|
|
|
function MakeMTEnd(segment, t, end) {
|
|
|
|
var endOffset = 8;
|
|
if (end) {
|
|
endOffset = -8;
|
|
}
|
|
|
|
var pos = GetPositionOnMT(segment, t);
|
|
var rotation = GetRotationOnMT(segment, t);
|
|
|
|
//make it
|
|
Entities.addEntity({
|
|
type: "Model",
|
|
name: "MT end",
|
|
position: {
|
|
x: pos.x + endOffset * rotation.tangent.x,
|
|
y: pos.y + endOffset * rotation.tangent.y,
|
|
z: pos.z + endOffset * rotation.tangent.z
|
|
},
|
|
rotation: rotation.rot,
|
|
dimensions: mtEndDimensions,
|
|
modelURL: baseLocation + mtEndURL
|
|
});
|
|
}
|
|
|
|
|
|
function MakeMTLabels() {
|
|
|
|
for (var mt = 0; mt < curves.length; mt++) {
|
|
for (var segment = 0; segment < curves[mt].length; segment++) {
|
|
if (segment == 0) {
|
|
MakeMTLabel(curves[mt][segment], 0);
|
|
}
|
|
MakeMTLabel(curves[mt][segment], 1);
|
|
}
|
|
}
|
|
|
|
}
|
|
|
|
function MakeMTLabel(segment, t) {
|
|
|
|
labelDistance = 150;
|
|
idDimensions = {
|
|
x: 75,
|
|
y: 75,
|
|
z: 100
|
|
};
|
|
|
|
CreateIdentification("microtubule", GetPositionOnMT(segment, t), GetRotationOnMT(segment, t).rot, idDimensions, labelDistance);
|
|
|
|
}
|
|
|
|
function GetPositionOnMT(segment, t) {
|
|
|
|
return pos = {
|
|
x: (1 - t) * (1 - t) * (1 - t) * (locations.cellLayout[0].x + segment[0].x) + 3 * t * (1 - t) * (1 - t) * (locations.cellLayout[0].x + segment[1].x) + 3 * t * t * (1 - t) * (locations.cellLayout[0].x + segment[2].x) + t * t * t * (locations.cellLayout[0].x + segment[3].x),
|
|
y: (1 - t) * (1 - t) * (1 - t) * (locations.cellLayout[0].y + segment[0].y) + 3 * t * (1 - t) * (1 - t) * (locations.cellLayout[0].y + segment[1].y) + 3 * t * t * (1 - t) * (locations.cellLayout[0].y + segment[2].y) + t * t * t * (locations.cellLayout[0].y + segment[3].y),
|
|
z: (1 - t) * (1 - t) * (1 - t) * (locations.cellLayout[0].z + segment[0].z) + 3 * t * (1 - t) * (1 - t) * (locations.cellLayout[0].z + segment[1].z) + 3 * t * t * (1 - t) * (locations.cellLayout[0].z + segment[2].z) + t * t * t * (locations.cellLayout[0].z + segment[3].z)
|
|
}
|
|
|
|
}
|
|
|
|
function GetRotationOnMT(segment, t) {
|
|
|
|
var dir = -1;
|
|
if (t < 0.5) {
|
|
dir = 1;
|
|
}
|
|
var tangent = Vec3.normalize({
|
|
x: 3 * (1 - t) * (1 - t) * ((locations.cellLayout[0].x + segment[1].x) - (locations.cellLayout[0].x + segment[0].x)) + 6 * t * (1 - t) * ((locations.cellLayout[0].x + segment[2].x) - (locations.cellLayout[0].x + segment[1].x)) + 3 * t * t * ((locations.cellLayout[0].x + segment[3].x) - (locations.cellLayout[0].x + segment[2].x)),
|
|
y: 3 * (1 - t) * (1 - t) * ((locations.cellLayout[0].y + segment[1].y) - (locations.cellLayout[0].y + segment[0].y)) + 6 * t * (1 - t) * ((locations.cellLayout[0].y + segment[2].y) - (locations.cellLayout[0].y + segment[1].y)) + 3 * t * t * ((locations.cellLayout[0].y + segment[3].y) - (locations.cellLayout[0].y + segment[2].y)),
|
|
z: 3 * (1 - t) * (1 - t) * ((locations.cellLayout[0].z + segment[1].z) - (locations.cellLayout[0].z + segment[0].z)) + 6 * t * (1 - t) * ((locations.cellLayout[0].z + segment[2].z) - (locations.cellLayout[0].z + segment[1].z)) + 3 * t * t * ((locations.cellLayout[0].z + segment[3].z) - (locations.cellLayout[0].z + segment[2].z))
|
|
});
|
|
var pitch = Quat.angleAxis(Math.asin(dir * -tangent.y) * 180.0 / Math.PI, {
|
|
x: 1,
|
|
y: 0,
|
|
z: 0
|
|
});
|
|
var yaw = Quat.angleAxis(Math.atan2(dir * tangent.x, dir * tangent.z) * 180.0 / Math.PI, {
|
|
x: 0,
|
|
y: 1,
|
|
z: 0
|
|
});
|
|
|
|
return {
|
|
rot: Quat.multiply(yaw, pitch),
|
|
tangent: tangent
|
|
};
|
|
|
|
}
|
|
|
|
|
|
var curves = [
|
|
[
|
|
[{
|
|
x: -495.1377539,
|
|
y: 447.6999851,
|
|
z: 67.71881918
|
|
}, {
|
|
x: -459.8060244,
|
|
y: 430.0299175,
|
|
z: 58.61231833
|
|
}, {
|
|
x: -430.0561194,
|
|
y: 393.4288088,
|
|
z: 58.18999042
|
|
}, {
|
|
x: -396.3439356,
|
|
y: 368.0364237,
|
|
z: 55.07196935
|
|
}],
|
|
[{
|
|
x: -396.3439356,
|
|
y: 368.0364237,
|
|
z: 55.07196935
|
|
}, {
|
|
x: -371.0597978,
|
|
y: 348.9921349,
|
|
z: 52.73345354
|
|
}, {
|
|
x: -343.5468781,
|
|
y: 336.252753,
|
|
z: 48.87861033
|
|
}, {
|
|
x: -313.7608397,
|
|
y: 326.6089999,
|
|
z: 39.67528364
|
|
}],
|
|
[{
|
|
x: -313.7608397,
|
|
y: 326.6089999,
|
|
z: 39.67528364
|
|
}, {
|
|
x: -283.2951845,
|
|
y: 316.7452089,
|
|
z: 30.26196812
|
|
}, {
|
|
x: -250.4514975,
|
|
y: 310.1199219,
|
|
z: 15.25331604
|
|
}, {
|
|
x: -221.5619658,
|
|
y: 302.4919751,
|
|
z: 6.625614572
|
|
}],
|
|
[{
|
|
x: -221.5619658,
|
|
y: 302.4919751,
|
|
z: 6.625614572
|
|
}, {
|
|
x: -191.9958819,
|
|
y: 294.6853925,
|
|
z: -2.204135545
|
|
}, {
|
|
x: -166.5713233,
|
|
y: 285.8286384,
|
|
z: -4.350569745
|
|
}, {
|
|
x: -145.8284432,
|
|
y: 264.5135505,
|
|
z: -12.40980801
|
|
}],
|
|
[{
|
|
x: -145.8284432,
|
|
y: 264.5135505,
|
|
z: -12.40980801
|
|
}, {
|
|
x: -133.0044557,
|
|
y: 251.3358039,
|
|
z: -17.39231622
|
|
}, {
|
|
x: -121.9698772,
|
|
y: 233.3962915,
|
|
z: -24.63478854
|
|
}, {
|
|
x: -111.9765579,
|
|
y: 220.2156326,
|
|
z: -34.7149099
|
|
}],
|
|
[{
|
|
x: -111.9765579,
|
|
y: 220.2156326,
|
|
z: -34.7149099
|
|
}, {
|
|
x: -97.01720198,
|
|
y: 200.4850343,
|
|
z: -49.80420286
|
|
}, {
|
|
x: -84.39111651,
|
|
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cellLayout = "Object Name,TranslateX,TranslateY,TranslateZ,DimensionX,DimensionY,DimensionZ, RotateX, RotateY, 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bule51,-309.9686316,345.4123975,-270.0235071,393.3619556,196.0721777,612.4700171,0,0,0;microtubule52,-461.5955127,164.0074951,-133.1996063,94.17870117,568.1300684,386.5102991,0,0,0;microtubule53,-349.3235669,233.7860156,-66.56753998,315.557124,399.5180273,164.2730255,0,0,0;microtubule54,-363.6500024,351.6772412,320.7801343,276.5947998,201.2884863,511.4768408,0,0,0;microtubule55,-393.347124,280.0743311,102.1417091,227.8053223,299.9349316,204.8680662,0,0,0;microtubule56,-227.535769,288.7856909,-53.67977051,539.6171338,325.6723096,250.9921875,0,0,0;microtubule6,-20.18329102,-70.09014084,-483.5474414,577.0610156,153.2483414,647.0252344,0,0,0;microtubule7,15.20736328,62.57915131,-463.1074878,619.3040039,159.3178107,683.8982666,0,0,0;microtubule8,557.853501,434.7157031,14.36625,435.7967871,218.8402734,572.1272461,0,0,0;microtubule9,790.0964648,302.6857306,-46.75898437,106.6875,484.5883044,487.1542383,0,0,0;mitochondria1,509.9553464,60.67585787,598.6037478,56.38573425,55.78621948,97.22390625,18.53970718,0,0;mitochondria2,236.1862652,8.347496228,771.7170695,69.44670044,68.70831848,160.0913306,0,-58.66119162,0;mitochondria3,-237.8879342,-80.8010362,794.9918666,74.3063324,72.65880615,278.4640576,12.50616674,-13.37802957,-34.78928216;mitochondria4,-480.3502638,0,623.5202907,56.38573425,55.78621948,97.22390625,0,0,0;mitochondria5,654.307804,246.0744739,370.0455458,69.44670044,68.70831848,160.0913306,-55.07883972,0,0;mitochondria6,0,-464.9341727,0,69.44670044,68.70831848,160.0913306,-25.64558815,-58.48676953,-21.37185167;mitochondria7,0,0,-581.7224431,69.44670044,68.70831848,160.0913306,4.948279917,-70.48661547,121.4859061;mitochondria8,624.0007,49.31601383,-87.21635338,69.44670044,68.70831848,160.0913306,89.76656115,-5.023110397,-48.14947773;nucleus,208.5936936,6.113100222,153.3202277,522.7149005,515.7176939,518.1826595,0,0,0;rough_ER1,253.871543,-69.16218018,184.1513013,624.6314062,553.1499756,621.0511084,0,0,0;rough_ER2,221.76854,64.61654297,146.9922729,621.8760059,558.2816016,585.9084229,0,0,0;smoothER,-132.954492,-89.25859014,80.62120204,376.5313623,386.0319287,318.3009668,122.954661,-71.58529221,-50.75833529;smoothER,-139.2748633,-37.55435675,275.4559992,350.3096777,359.3174121,299.3762402,-12.50517141,-27.97002065,5.954923214;smoothER,243.6573639,10.98815226,-278.1663356,402.7864746,412.9494434,340.4957227,0,0,0;";
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}
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Script.setTimeout(function() {
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CreateNavigationButton(scenes[0], 'cells');
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CreateNavigationButton(scenes[1], 'inside_the_cell');
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CreateNavigationButton(scenes[2], 'ribosome');
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CreateNavigationButton(scenes[3], 'hexokinase');
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for (var i = 0; i < scenes.length; i++) {
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ImportScene(scenes[i]);
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// print('setting up scene. then import')
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}
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createLayoutLights();
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}, 3500)
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// Script.scriptEnding.connect(function() {
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// Entities.addingEntity.disconnect(makeUngrabbable);
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// });
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// Script.setTimeout(function() {
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// print('JBP stopping cell science import');
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// Script.stop();
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// }, 30000)
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